Search results for "Biological computation"

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Guest Editors' Introduction to the Special Section on Algorithms in Bioinformatics

2008

Computer scienceApplied MathematicsComputational genomicsGeneticsSpecial sectionGenomicsAlgorithm designBioinformaticsBiological computationBiotechnologyComputational and Statistical GeneticsIEEE/ACM Transactions on Computational Biology and Bioinformatics
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Probing the operability regime of an engineered ribocomputing unit in terms of dynamic range maintenance with extracellular changes and time

2020

Synthetic biology aims at engineering gene regulatory circuits to end with cells (re)programmed on purpose to implement novel functions or discover natural behaviors. However, one overlooked question is whether the resulting circuits perform as intended in variety of environments or with time. Here, we considered a recently engineered genetic system that allows programming the cell to work as a minimal computer (arithmetic logic unit) in order to analyze its operability regime. This system involves transcriptional and post-transcriptional regulations. In particular, we studied the analog behavior of the system, the effect of physicochemical changes in the environment, the impact on cell gro…

0301 basic medicineEnvironmental EngineeringOperabilityProcess (engineering)Computer scienceSystems biologyBiomedical EngineeringHeterologous03 medical and health sciencesArithmetic logic unitSynthetic biology0302 clinical medicinelcsh:QH301-705.5Molecular BiologySynthetic biologyBiological computationResearchCell BiologyExpression (computer science)030104 developmental biologyRegulatory RNAlcsh:Biology (General)Heterologous expressionBiological systemSystems biology030217 neurology & neurosurgery
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